CDS

Accession Number TCMCG051C21353
gbkey CDS
Protein Id XP_024459270.1
Location complement(join(21485627..21485700,21486022..21486130,21486473..21486583,21486948..21487061,21487172..21487306,21487392..21487540,21487651..21487729,21487855..21488007,21488075..21488131,21488247..21488329,21489089..21489188,21489292..21489498,21489987..21490457))
Gene LOC7479491
GeneID 7479491
Organism Populus trichocarpa

Protein

Length 613aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024603502.1
Definition prolycopene isomerase, chloroplastic isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category H
Description Prolycopene isomerase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R07512        [VIEW IN KEGG]
KEGG_rclass RC01960        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K09835        [VIEW IN KEGG]
EC 5.2.1.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009657        [VIEW IN EMBL-EBI]
GO:0009662        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016859        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046608        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTCTAGGGTTCAAGAATTCTATATTTTCTGGTCAGTTCAATACTGTCCAGTTAGGGAGGTTCAGACCCAGAAGCCAAAAACATAGGATTTCGTCTGTAGAACCTGTCCAAACCTCAGTTTTCAGTGGTTATATTGTGCCCAGAAACATAAAAAGCAAAATTGACAGTCTTGGTGAAGTAAAGTTAAATAAGGACTTTATTTTGAGGTCAAAGGCCGTGTTAACTGTGGATAAAGAAGTGGATATTGAAGGAAATGAAGGAGTGAGCAGAGAGAGGAGTGATTATGATGTAATTGTTATTGGGTCTGGTATTGTTGGGTTGGTTGCTGCTACACAGTTGGCAGTGAAGGGAGCTAAAGTTTTGGTCTTGGAGAAGTATGTGATTCCTGGTGGGAGTTCTGGGTATTATGAGAGGGATGGATATACTTTTGATGTTGGCTCTTCTGTTATGTTTGGTTTCAGTGACAAGGGCAACCTAAATATGATAACACGAGCATTGGCAGCAGTTGGTTGTGAAATGGAGGTGATTCCTGATCCCACTACTGTCCATTTTCATCTACCTAATAACCTTTCTGTTAAAGTTCCCAAAGAGTACAGCGACTTCATCTCAGAACTTACTGCTAAGTTTCCCCATGAAAAGGAAGGGATCCTTAAATTCTATAGTGAATGCTGGAAGATATTCAATGCCTTGAACTCTTTGGAACTGAAGTCGCTCGAGGAGCCAATCTACCTGCTTGGACAATTCTTTCAGAAGCCTCTTGAATGCTTGACACTAGCTTATTATCTGCCCCAAAATGCTGGAGACATCGCTCGAAAGTACATAAACGATCCTGAGTTGTTGTCTTTCATTGATGCAGAGTGTTTCATAGTAAGCACAGTCAATGCTTTGCAGACCCCAATGATCAATGCGGGCATGGTTTTATGTGATAGGCATTTTGGAGGGATCAATTATCCTGTTGGTGGGGTTGGTGGAATTGCAAAGTCCTTGTCAAAAGGTCTGATTGATCAGGGCAGTGAAATTCTTTACAGGGCAAACGCGACCAACATCATTCTTGAGCATGGAAAGGCTGTAGGAGTGAGGCTTTCAGATGGAAGGGAGTTCTTTGCCAAAACCATAATATCAAATGCTACTAGATGGGATACCTTTGGGAAGTTGTTGAAAGGAGAAACCCTTCCAAAAGAGGAAGAAAATTTTCAAAAAGTTTATGTCAAGGCTCCATCTTTTCTTTCCATTCACATGGGTGTTAAAGCCGAGGTTCTACCACCAGATACAGATTGCCACCACTTTGTTCTTGAGGATGACTGGGCAAGATTAGAGGAGCCTTATGGAAGCATATTCCTAAGCATTCCAACTGTTCTTGATTCATCATTGGCTCCTGAAGGCCGTCATATACTCCACATATTTACAACATCTTCCATTGAAGACTGGGAGGGACTCTCGACAGAGGACTACGAGGCAAAGAAGAAGGTTGTGGCTTATGAGATTATAAGCAGATTGGAGAAGAAACTTTTTCCGGGGCTCAGATCATCAATTACTTTCATGGAGGTAGGTTCACCCAAGACACACAGGAGGTACTTGGCTCGTGACAAGGGTACATATGGACCAATGCCACGCAGTACTCCTAAAGGTTTATTGGGAATGCCATTCAATACAACAGCTGTAGATGGTCTTTACTGTGTTGGCGATAGCTGCTTTCCAGGACAGGGTGTTATAGCTGTAGCTTTTTCAGGAGTAATGTGTGCTCATCGAGTAGCTGCTGATATTGGCATTGAGAAAAGGTCCCCTGTAATGGATGCTGCTCTCCTCCGGCTTCTTGGTTGGTTAAGGACCTTGGCTTGA
Protein:  
MSLGFKNSIFSGQFNTVQLGRFRPRSQKHRISSVEPVQTSVFSGYIVPRNIKSKIDSLGEVKLNKDFILRSKAVLTVDKEVDIEGNEGVSRERSDYDVIVIGSGIVGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNMITRALAAVGCEMEVIPDPTTVHFHLPNNLSVKVPKEYSDFISELTAKFPHEKEGILKFYSECWKIFNALNSLELKSLEEPIYLLGQFFQKPLECLTLAYYLPQNAGDIARKYINDPELLSFIDAECFIVSTVNALQTPMINAGMVLCDRHFGGINYPVGGVGGIAKSLSKGLIDQGSEILYRANATNIILEHGKAVGVRLSDGREFFAKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWARLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSIEDWEGLSTEDYEAKKKVVAYEIISRLEKKLFPGLRSSITFMEVGSPKTHRRYLARDKGTYGPMPRSTPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKRSPVMDAALLRLLGWLRTLA